STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD52055.1Arylsulfotransferase (ASST). (484 aa)    
Predicted Functional Partners:
SDD52007.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.775
SDD66254.1
Di-and tricarboxylate transporter.
  
     0.661
SDD72535.1
Arylsulfotransferase (ASST).
  
     0.626
SDD84409.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.608
SDE09569.1
Di-and tricarboxylate transporter.
  
     0.607
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.570
SDD52098.1
Nitroreductase.
   
   0.524
SDD12288.1
Nitrate reductase gamma subunit.
  
     0.511
SDD10378.1
Thioredoxin reductase (NADPH).
   
  0.468
SDD95684.1
Thioredoxin reductase (NADPH).
   
  0.468
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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