node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD53880.1 | SDD53931.1 | SAMN04489866_10461 | SAMN04489866_10462 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.948 |
SDD53880.1 | SDD64619.1 | SAMN04489866_10461 | SAMN04489866_10537 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 23S rRNA pseudouridine1911/1915/1917 synthase. | 0.803 |
SDD53880.1 | SDD98764.1 | SAMN04489866_10461 | SAMN04489866_11225 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.768 |
SDD53880.1 | cysS | SAMN04489866_10461 | SAMN04489866_10278 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.779 |
SDD53880.1 | dnaJ | SAMN04489866_10461 | SAMN04489866_1055 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.760 |
SDD53880.1 | mrnC | SAMN04489866_10461 | SAMN04489866_10458 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.866 |
SDD53880.1 | rplC | SAMN04489866_10461 | SAMN04489866_102112 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.805 |
SDD53880.1 | rplK | SAMN04489866_10461 | SAMN04489866_10297 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.931 |
SDD53880.1 | rplU | SAMN04489866_10461 | SAMN04489866_103184 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.758 |
SDD53880.1 | rsfS | SAMN04489866_10461 | SAMN04489866_10123 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.761 |
SDD53931.1 | SDD53880.1 | SAMN04489866_10462 | SAMN04489866_10461 | Hypothetical protein. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.948 |
SDD53931.1 | cysS | SAMN04489866_10462 | SAMN04489866_10278 | Hypothetical protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.720 |
SDD53931.1 | mrnC | SAMN04489866_10462 | SAMN04489866_10458 | Hypothetical protein. | Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.930 |
SDD64619.1 | SDD53880.1 | SAMN04489866_10537 | SAMN04489866_10461 | 23S rRNA pseudouridine1911/1915/1917 synthase. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.803 |
SDD64619.1 | SDD98764.1 | SAMN04489866_10537 | SAMN04489866_11225 | 23S rRNA pseudouridine1911/1915/1917 synthase. | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.772 |
SDD64619.1 | dnaJ | SAMN04489866_10537 | SAMN04489866_1055 | 23S rRNA pseudouridine1911/1915/1917 synthase. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.741 |
SDD64619.1 | rplC | SAMN04489866_10537 | SAMN04489866_102112 | 23S rRNA pseudouridine1911/1915/1917 synthase. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.782 |
SDD64619.1 | rplK | SAMN04489866_10537 | SAMN04489866_10297 | 23S rRNA pseudouridine1911/1915/1917 synthase. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.752 |
SDD64619.1 | rplU | SAMN04489866_10537 | SAMN04489866_103184 | 23S rRNA pseudouridine1911/1915/1917 synthase. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.796 |
SDD64619.1 | rsfS | SAMN04489866_10537 | SAMN04489866_10123 | 23S rRNA pseudouridine1911/1915/1917 synthase. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.771 |