STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD64086.1Electron transfer flavoprotein alpha subunit apoprotein. (329 aa)    
Predicted Functional Partners:
SDD56506.1
Electron transfer flavoprotein beta subunit.
 0.997
SDD39652.1
Electron transfer flavoprotein beta subunit.
 0.996
SDD64047.1
Electron transfer flavoprotein beta subunit.
 0.996
SDD64005.1
butyryl-CoA dehydrogenase.
 
 0.991
SDD56472.1
Acyl-CoA dehydrogenase.
 
 0.984
SDD63967.1
Glycolate oxidase.
  
 
 0.844
SDD39594.1
Ferredoxin like protein.
 
 0.821
SDE03586.1
[FeFe] hydrogenase, group B1/B3.
  
 0.794
SDD67518.1
Hypothetical protein.
 
 
0.760
SDD85076.1
Glycolate oxidase.
  
 
 0.730
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.