STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD83703.1Energy-coupling factor transport system ATP-binding protein. (464 aa)    
Predicted Functional Partners:
SDD83742.1
Energy-coupling factor transport system permease protein.
 
 0.994
ecfT
Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.960
SDD83781.1
Energy-coupling factor transport system substrate-specific component.
 
     0.943
SDD83815.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.922
SDD83641.1
Putative efflux protein, MATE family.
 
     0.889
SDD83603.1
Hypothetical protein.
 
     0.801
SDD55424.1
ATP-binding cassette, subfamily B.
 
  
 
0.661
SDD94727.1
ATP-binding cassette, subfamily B.
 
  
 
0.661
SDD83849.1
Recombinase zinc beta ribbon domain-containing protein.
 
     0.634
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
0.609
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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