STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD95684.1Thioredoxin reductase (NADPH). (292 aa)    
Predicted Functional Partners:
SDE05954.1
Thioredoxin reductase (NADPH).
  
  
 
0.798
SDD39504.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.796
SDD23498.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.759
SDD12250.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.721
SDD10378.1
Thioredoxin reductase (NADPH).
  
 
0.719
SDE09347.1
Peroxiredoxin.
 
 
 0.642
SDD90364.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.565
SDD29599.1
Small redox-active disulfide protein 2.
   
 0.559
SDD67986.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
   
 0.551
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.515
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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