Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDD40720.1 | SDD97969.1 | SAMN04489866_10357 | SAMN04489866_1123 | DNA topoisomerase-3. | Conserved hypothetical protein (putative transposase or invertase). | 0.503 |
| SDD40720.1 | SDD98008.1 | SAMN04489866_10357 | SAMN04489866_1124 | DNA topoisomerase-3. | Conserved hypothetical protein (putative transposase or invertase). | 0.513 |
| SDD40720.1 | SDD98104.1 | SAMN04489866_10357 | SAMN04489866_1126 | DNA topoisomerase-3. | Single-strand binding protein. | 0.844 |
| SDD40720.1 | topA | SAMN04489866_10357 | SAMN04489866_11242 | DNA topoisomerase-3. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.548 |
| SDD97969.1 | SDD40720.1 | SAMN04489866_1123 | SAMN04489866_10357 | Conserved hypothetical protein (putative transposase or invertase). | DNA topoisomerase-3. | 0.503 |
| SDD97969.1 | SDD98008.1 | SAMN04489866_1123 | SAMN04489866_1124 | Conserved hypothetical protein (putative transposase or invertase). | Conserved hypothetical protein (putative transposase or invertase). | 0.428 |
| SDD97969.1 | SDD98354.1 | SAMN04489866_1123 | SAMN04489866_11213 | Conserved hypothetical protein (putative transposase or invertase). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.439 |
| SDD97969.1 | topA | SAMN04489866_1123 | SAMN04489866_11242 | Conserved hypothetical protein (putative transposase or invertase). | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.437 |
| SDD98008.1 | SDD40720.1 | SAMN04489866_1124 | SAMN04489866_10357 | Conserved hypothetical protein (putative transposase or invertase). | DNA topoisomerase-3. | 0.513 |
| SDD98008.1 | SDD97969.1 | SAMN04489866_1124 | SAMN04489866_1123 | Conserved hypothetical protein (putative transposase or invertase). | Conserved hypothetical protein (putative transposase or invertase). | 0.428 |
| SDD98008.1 | SDD98052.1 | SAMN04489866_1124 | SAMN04489866_1125 | Conserved hypothetical protein (putative transposase or invertase). | Hypothetical protein. | 0.448 |
| SDD98008.1 | SDD98104.1 | SAMN04489866_1124 | SAMN04489866_1126 | Conserved hypothetical protein (putative transposase or invertase). | Single-strand binding protein. | 0.438 |
| SDD98008.1 | SDD98354.1 | SAMN04489866_1124 | SAMN04489866_11213 | Conserved hypothetical protein (putative transposase or invertase). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.439 |
| SDD98008.1 | topA | SAMN04489866_1124 | SAMN04489866_11242 | Conserved hypothetical protein (putative transposase or invertase). | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.437 |
| SDD98052.1 | SDD98008.1 | SAMN04489866_1125 | SAMN04489866_1124 | Hypothetical protein. | Conserved hypothetical protein (putative transposase or invertase). | 0.448 |
| SDD98052.1 | SDD98104.1 | SAMN04489866_1125 | SAMN04489866_1126 | Hypothetical protein. | Single-strand binding protein. | 0.752 |
| SDD98104.1 | SDD40720.1 | SAMN04489866_1126 | SAMN04489866_10357 | Single-strand binding protein. | DNA topoisomerase-3. | 0.844 |
| SDD98104.1 | SDD98008.1 | SAMN04489866_1126 | SAMN04489866_1124 | Single-strand binding protein. | Conserved hypothetical protein (putative transposase or invertase). | 0.438 |
| SDD98104.1 | SDD98052.1 | SAMN04489866_1126 | SAMN04489866_1125 | Single-strand binding protein. | Hypothetical protein. | 0.752 |
| SDD98104.1 | topA | SAMN04489866_1126 | SAMN04489866_11242 | Single-strand binding protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.844 |
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