STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE04080.1Sodium:sulfate symporter transmembrane region. (483 aa)    
Predicted Functional Partners:
SDE04043.1
Arylsulfotransferase (ASST).
 
     0.861
SDE04117.1
Arylsulfotransferase (ASST).
 
     0.695
SDD72535.1
Arylsulfotransferase (ASST).
  
     0.679
SDE09569.1
Di-and tricarboxylate transporter.
  
     0.671
SDD66254.1
Di-and tricarboxylate transporter.
  
     0.604
SDD63564.1
Conserved hypothetical integral membrane protein.
  
     0.581
SDD15972.1
Arylsulfotransferase (ASST).
  
     0.560
SDD52007.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.496
SDE04006.1
Uncharacterized protein.
       0.473
SDD84409.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.469
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.