STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS84079.1O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)    
Predicted Functional Partners:
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
 
 
 0.978
AOS84016.1
Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.933
AOS84023.1
Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.917
AOS83293.1
Serine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.909
AOS83790.1
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.909
AOS84178.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.909
AOS84184.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.909
AOS84451.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.907
AOS83514.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.901
AOS84486.1
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.901
Your Current Organism:
Chlorobaculum limnaeum
NCBI taxonomy Id: 274537
Other names: C. limnaeum, Chlorobaculum limnaeum Imhoff 2003
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