Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOS84618.1 | bchF2 | BIU88_11015 | BIU88_11020 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-vinyl bacteriochlorophyllide hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.565 |
AOS84618.1 | bciD | BIU88_11015 | BIU88_11010 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Involved in the biosynthesis of bacteriochlorophyll e (BChl e). Catalyzes two consecutive hydroxylation reactions of the C-7 methyl group of bacteriochlorophyllide c (BChlide c) to form a geminal diol intermediate that spontaneously dehydrates to produce the formyl group of bacteriochlorophyllide e (BChlide e). Also able to catalyze the same reaction for bacteriochlorophyllide d (BChlide d) to give rise to bacteriochlorophyllide f (BChlide f). | 0.477 |
bchF2 | AOS84618.1 | BIU88_11020 | BIU88_11015 | 2-vinyl bacteriochlorophyllide hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.565 |
bciD | AOS84618.1 | BIU88_11010 | BIU88_11015 | Hypothetical protein; Involved in the biosynthesis of bacteriochlorophyll e (BChl e). Catalyzes two consecutive hydroxylation reactions of the C-7 methyl group of bacteriochlorophyllide c (BChlide c) to form a geminal diol intermediate that spontaneously dehydrates to produce the formyl group of bacteriochlorophyllide e (BChlide e). Also able to catalyze the same reaction for bacteriochlorophyllide d (BChlide d) to give rise to bacteriochlorophyllide f (BChlide f). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.477 |