STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO16091.1Putative tyrosine-protein phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (348 aa)    
Predicted Functional Partners:
licA
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.705
SBO16090.1
Putative permease IIC component YwbA; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.705
licB
Phosphotransferase system (PTS) lichenan-specific enzyme IIB component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.672
ybaR
Putative sulfate transporter YbaR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.612
SBO16093.1
Protein tyrosine/serine phosphatase.
 
    
0.516
SBO18552.1
Protein of unknown function; No homology to any previously reported sequences.
    
   0.497
SBO16087.1
PTS system transcriptional activator.
       0.454
uhpT
Hexose phosphate transport protein; Function of strongly homologous gene; transporter.
       0.431
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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