STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO16447.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (275 aa)    
Predicted Functional Partners:
SBO16448.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.932
ugl
Unsaturated glucuronyl hydrolase; Function of strongly homologous gene; enzyme.
 
     0.892
kduI
5-dehydro-4-deoxy-D-glucuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
     0.730
gmuF
Phosphohexomutase; Function of strongly homologous gene; enzyme; Belongs to the mannose-6-phosphate isomerase type 1 family.
 
      0.672
galM
Aldose epimerase (mutarotase); Converts alpha-aldose to the beta-anomer.
       0.648
idnO
Gluconate 5-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.632
SBO16445.1
Beta-galactosidase; Function of strongly homologous gene; enzyme.
 
     0.617
SBO16439.1
Kinase, PfkB family.
      0.545
SBO16436.1
Polysaccharide lyase family 8 like; Function of strongly homologous gene; enzyme.
 
     0.419
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.