STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO16557.1Putative Predicted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (785 aa)    
Predicted Functional Partners:
csc1B-4
Cell surface protein with WxL domain.
  
   0.702
SBO17131.1
NRPS-PKS protein putatively involved in antibiotic synthese; Function of strongly homologous gene; cell process.
  
 
 0.652
SBO17135.1
Function of strongly homologous gene; cell process.
  
 
 0.642
SBO16560.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.610
prtB
LPXTG-motif cell wall anchor domain protein; Belongs to the peptidase S8 family.
  
 
 0.501
SBO16559.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.438
ctpA
Carboxy-terminal processing protease; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S41A family.
  
   0.433
SBO16556.1
Hydrolase, NUDIX family (fragment).
     
 0.424
SBO18188.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
    
 
 0.422
SBO17625.1
Putative cell-division FtsK/SpoIIIE-family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
   
 
 0.406
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.