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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO16700.1Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (490 aa)    
Predicted Functional Partners:
chbA
Chitin binding domain protein.
       0.474
SBO16701.1
Ykud domain protein.
       0.463
SBO17197.1
PTS system, beta-glucoside-specific IIABC subunit.
  
 
 0.447
SBO17213.1
PTS system, beta-glucoside-specific IIABC component.
  
 
 0.447
bglF
Fused beta-glucoside-specific PTS enzymes: IIA component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.447
bglP
PTS system beta-glucoside-specific EIIBCA component (Includes: Beta-glucoside-specific phosphotransferase enzyme IIB component; Beta-glucoside permease IIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component).
  
 
 0.447
scrA
PTS beta-glucoside transporter subunit EIIBCA; PTS system sucrose-specific EIIBCA component (Includes: Sucrose-specific phosphotransferase enzyme IIB component; Sucrose permease IIC component; Sucrose-specific phosphotransferase enzyme IIA component).
  
 
 0.447
SBO17063.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.442
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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