STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO17621.1Putative conjugative transposon protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (104 aa)    
Predicted Functional Partners:
SBO17622.1
Putative conjugative transposon protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
    0.949
SBO17625.1
Putative cell-division FtsK/SpoIIIE-family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
    0.942
SBO17626.1
Putative replication protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
    0.894
SBO17628.1
Putative conjugative transposon protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
 
    0.886
SBO17633.1
Putative conjugative transposon protein (membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
    0.821
SBO17630.1
Putative antirestriction protein, transposon function; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
 
    0.820
CDIV41_320198
Homologs of previously reported genes of unknown function;fragment of conserved membrane hypothetical protein (part 2).
 
     0.789
SBO17634.1
Conjugative transposon protein, ATPase activity; Function of strongly homologous gene; cell process.
 
    0.787
SBO17638.1
Putative conjugative transposon protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
     0.784
SBO17623.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.727
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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