STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yitWConserved hypothetical protein; Homologs of previously reported genes of unknown function. (111 aa)    
Predicted Functional Partners:
sufC
Sulfur mobilizing ABC protein, ATPase; Function of strongly homologous gene; enzyme.
 
  
 0.797
sufD
FeS assembly protein SufD; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
   
 0.744
sufB
FeS cluster formation protein; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
   
 0.704
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.650
sufU
Iron-sulfur cluster assembly scaffold protein; Function of homologous gene experimentally demonstrated in an other organism; factor.
  
    0.615
maoC
MaoC like domain protein.
  
  
 0.588
yitV
Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.585
yitU
Putative phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.532
SBO17668.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.497
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.