Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SBO17674.1Hypothetical protein; No homology to any previously reported sequences. (216 aa)    
Predicted Functional Partners:
SBO17135.1
Function of strongly homologous gene; cell process.
 
 
 0.943
SBO17131.1
NRPS-PKS protein putatively involved in antibiotic synthese; Function of strongly homologous gene; cell process.
  
 
 0.900
SBO17134.1
Function of strongly homologous gene; cell process.
 
  
 0.736
SBO17675.1
Uncharacterized oxidoreductase; Function of strongly homologous gene; putative enzyme.
 
   
 0.632
SBO17673.1
Putative transcriptional regulator (MerR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.625
SBO17672.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.510
SBO17133.1
NRPS-PKS protein involved in antibiotic synthesis; Function of strongly homologous gene; cell process.
  
 
 0.426
menE
O-succinylbenzoic acid-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
  
 
 0.426
SBO17139.1
Putative acyl transferase, polyketide synthase related; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.423
SBO17671.1
Putative MFS general substrate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.400
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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