STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypiATetratricopeptide repeat family protein. (421 aa)    
Predicted Functional Partners:
ypiB
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; ; Belongs to the UPF0302 family.
 
    0.884
SBO17708.1
Putative 3-dehydroquinate synthase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.840
ytxK
Putative nucleic acid methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.759
SBO17701.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.756
SBO18441.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.750
SBO17744.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0346 family.
 
     0.733
SBO18070.1
Putative Protein involved in establishment of DNA transport in competence; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.707
ltaSA-2
Exported glycerol phosphate lipoteichoic acid synthetase and anion-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.689
ltaSA
Exported glycerol phosphate lipoteichoic acid synthetase and anion-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.686
divIB
Cell division protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
   
 0.682
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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