STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yplQPutative membrane hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (219 aa)    
Predicted Functional Partners:
SBO17740.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.593
mdtG
Putative metabolite efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
  
 0.555
ykkC
Efflux transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.
      
 0.545
ykkD
Efflux transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.
      
 0.545
penP
Beta-lactamase precursor; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.542
SBO17135.1
Function of strongly homologous gene; cell process.
  
  
 0.535
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.501
SBO18159.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.460
SBO17741.1
GDSL-like Lipase/Acylhydrolase family protein.
       0.447
msrA-2
Peptide methionine S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.436
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.