STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctpACarboxy-terminal processing protease; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S41A family. (488 aa)    
Predicted Functional Partners:
deoD
Purine nucleoside phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.789
SBO17744.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0346 family.
       0.754
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.752
SBO17742.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.751
msrA-2
Peptide methionine S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
    0.718
SBO16212.1
Tetratricopeptide repeat family protein.
  
 
 0.688
SBO17741.1
GDSL-like Lipase/Acylhydrolase family protein.
       0.683
sipV
Type I signal peptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S26 family.
 
  
 0.644
sipS
Type I signal peptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S26 family.
 
  
 0.619
levR
Transcriptional regulator.
  
     0.587
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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