STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO17774.13-demethylubiquinone-9 3-methyltransferase family protein. (135 aa)    
Predicted Functional Partners:
SBO17027.1
Putative 3-demethylubiquinone-9 3-methyltransferase domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.822
SBO16867.1
PhnB protein.
 
  
 0.750
SBO17013.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.646
chiA
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
    0.557
SBO18179.1
Glyoxalase family protein.
 
     0.521
SBO16995.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.503
SBO17773.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.493
dsbB
Disulfide bond formation protein DsbB (Disulfide oxidoreductase); Function of strongly homologous gene; enzyme; Belongs to the DsbB family.
       0.470
SBO18381.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.452
ywnB
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.448
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
Server load: low (40%) [HD]