Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBO17780.1 | msrR | CDIV41_320343 | CDIV41_320342 | Putative Uncharacterized HTH-type transcriptional regulator YxaD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Regulatory protein MsrR. | 0.519 |
| codY | msrR | CDIV41_320320 | CDIV41_320342 | Transcriptional regulator, GTP and BCAA-dependent; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | Regulatory protein MsrR. | 0.505 |
| codY | sepF | CDIV41_320320 | CDIV41_40055 | Transcriptional regulator, GTP and BCAA-dependent; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | Cell division machinery factor; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.451 |
| mgfK | msrR | CDIV41_120066 | CDIV41_320342 | Gluconeogenesis morphogenetic factor; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Regulatory protein MsrR. | 0.432 |
| msrR | SBO17780.1 | CDIV41_320342 | CDIV41_320343 | Regulatory protein MsrR. | Putative Uncharacterized HTH-type transcriptional regulator YxaD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.519 |
| msrR | codY | CDIV41_320342 | CDIV41_320320 | Regulatory protein MsrR. | Transcriptional regulator, GTP and BCAA-dependent; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.505 |
| msrR | mgfK | CDIV41_320342 | CDIV41_120066 | Regulatory protein MsrR. | Gluconeogenesis morphogenetic factor; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.432 |
| msrR | pfpI | CDIV41_320342 | CDIV41_320341 | Regulatory protein MsrR. | Intracellular protease 1. | 0.497 |
| msrR | sepF | CDIV41_320342 | CDIV41_40055 | Regulatory protein MsrR. | Cell division machinery factor; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.453 |
| pfpI | msrR | CDIV41_320341 | CDIV41_320342 | Intracellular protease 1. | Regulatory protein MsrR. | 0.497 |
| sepF | codY | CDIV41_40055 | CDIV41_320320 | Cell division machinery factor; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Transcriptional regulator, GTP and BCAA-dependent; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.451 |
| sepF | msrR | CDIV41_40055 | CDIV41_320342 | Cell division machinery factor; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Regulatory protein MsrR. | 0.453 |