STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO17805.1Purine catabolism regulatory-like family protein. (541 aa)    
Predicted Functional Partners:
SBO17807.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.787
o
Sugar (And other) transporter family protein.
 
     0.781
allC
Allantoate amidohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.780
fdrA
Protein fdrA.
 
     0.769
yahG
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.765
SBO17815.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.761
ylbA
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.750
ybbW
Allantoin or uracil transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   
 0.743
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
   
 0.737
pucG
Vitamin B6-dependent (S)-ureidoglycinenglyoxylate aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.690
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.