STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dtpTDi-tripeptide-proton ABC symporter; Function of homologous gene experimentally demonstrated in an other organism; transporter. (486 aa)    
Predicted Functional Partners:
pepT
Peptidase T (tripeptidase); Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
      
 0.588
yqhT
Putative aminopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase M24B family.
  
  
 0.583
pepQ
Xaa-Pro dipeptidase; Belongs to the peptidase M24B family.
  
  
 0.501
SBO17994.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.487
asnB
Asparagine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.485
pepF
Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.478
SBO17824.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.474
oppB
Oligopeptide ABC transporter (permease); Function of homologous gene experimentally demonstrated in an other organism; transporter.
     
 0.421
oppD
Oligopeptide ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
     
 0.418
SBO17822.1
Hypothetical protein; No homology to any previously reported sequences.
       0.411
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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