STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO17885.1Exported hypothetical protein; No homology to any previously reported sequences. (306 aa)    
Predicted Functional Partners:
SBO17014.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.697
SBO17168.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.686
SBO16459.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.640
SBO18364.1
NlpC/P60 family protein.
 
  
 0.617
SBO16187.1
NlpC/P60 family protein.
 
  
 0.606
cobB
NAD-dependent protein deacetylase; Function of strongly homologous gene; enzyme.
       0.582
SBO16343.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
   
 0.574
SBO18555.1
NlpC/P60 family protein.
  
  
 0.548
SBO16461.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.538
SBO16355.1
3D domain protein.
  
  
 0.507
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.