Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBO17492.1 | SBO17896.1 | CDIV41_320053 | CDIV41_320459 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | NUDIX domain protein. | 0.490 |
| SBO17492.1 | hemN | CDIV41_320053 | CDIV41_320461 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.648 |
| SBO17492.1 | liaS | CDIV41_320053 | CDIV41_320054 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Histidine kinase family protein. | 0.978 |
| SBO17896.1 | SBO17492.1 | CDIV41_320459 | CDIV41_320053 | NUDIX domain protein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.490 |
| SBO17896.1 | SBO18563.1 | CDIV41_320459 | CDIV41_50109 | NUDIX domain protein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.413 |
| SBO17896.1 | grpE | CDIV41_320459 | CDIV41_320457 | NUDIX domain protein. | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.437 |
| SBO17896.1 | hemN | CDIV41_320459 | CDIV41_320461 | NUDIX domain protein. | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.655 |
| SBO17896.1 | hrcA | CDIV41_320459 | CDIV41_320458 | NUDIX domain protein. | Transcriptional regulator of heat-shock genes; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.466 |
| SBO17896.1 | liaS | CDIV41_320459 | CDIV41_320054 | NUDIX domain protein. | Histidine kinase family protein. | 0.413 |
| SBO17896.1 | polA | CDIV41_320459 | CDIV41_320673 | NUDIX domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.454 |
| SBO17896.1 | recJ | CDIV41_320459 | CDIV41_320509 | NUDIX domain protein. | Putative single-strand DNA-specific exonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.410 |
| SBO17896.1 | ydiF-3 | CDIV41_320459 | CDIV41_320460 | NUDIX domain protein. | Uncharacterized ABC transporter ATP-binding protein YdiF. | 0.482 |
| SBO18563.1 | SBO17896.1 | CDIV41_50109 | CDIV41_320459 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | NUDIX domain protein. | 0.413 |
| SBO18563.1 | polA | CDIV41_50109 | CDIV41_320673 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.661 |
| SBO18563.1 | recJ | CDIV41_50109 | CDIV41_320509 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative single-strand DNA-specific exonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.480 |
| grpE | SBO17896.1 | CDIV41_320457 | CDIV41_320459 | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | NUDIX domain protein. | 0.437 |
| grpE | hrcA | CDIV41_320457 | CDIV41_320458 | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | Transcriptional regulator of heat-shock genes; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.981 |
| grpE | polA | CDIV41_320457 | CDIV41_320673 | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.597 |
| grpE | recJ | CDIV41_320457 | CDIV41_320509 | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | Putative single-strand DNA-specific exonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.464 |
| hemN | SBO17492.1 | CDIV41_320461 | CDIV41_320053 | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.648 |
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