| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| infB | nusA | CDIV41_320467 | CDIV41_320470 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | 0.994 |
| infB | rbfA | CDIV41_320467 | CDIV41_320466 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.977 |
| infB | rimP | CDIV41_320467 | CDIV41_320471 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosome maturation factor; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.898 |
| infB | rplGA | CDIV41_320467 | CDIV41_320468 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein L7Ae; Function of homologous gene experimentally demonstrated in an other organism; factor. | 0.996 |
| infB | rpsB | CDIV41_320467 | CDIV41_320481 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family. | 0.992 |
| infB | rpsF | CDIV41_320467 | CDIV41_10051 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein S6 (BS9); Binds together with S18 to 16S ribosomal RNA. | 0.972 |
| infB | rpsG | CDIV41_320467 | CDIV41_270089 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein S7 (BS7); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.987 |
| infB | rpsJ | CDIV41_320467 | CDIV41_270094 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein S10 (BS13); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.982 |
| infB | rpsL | CDIV41_320467 | CDIV41_270088 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein S12 (BS12); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.977 |
| infB | ylxR | CDIV41_320467 | CDIV41_320469 | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Putative RNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.944 |
| nusA | infB | CDIV41_320470 | CDIV41_320467 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.994 |
| nusA | rbfA | CDIV41_320470 | CDIV41_320466 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.825 |
| nusA | rimP | CDIV41_320470 | CDIV41_320471 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosome maturation factor; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.967 |
| nusA | rplGA | CDIV41_320470 | CDIV41_320468 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosomal protein L7Ae; Function of homologous gene experimentally demonstrated in an other organism; factor. | 0.971 |
| nusA | rpsB | CDIV41_320470 | CDIV41_320481 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosomal protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family. | 0.962 |
| nusA | rpsF | CDIV41_320470 | CDIV41_10051 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosomal protein S6 (BS9); Binds together with S18 to 16S ribosomal RNA. | 0.815 |
| nusA | rpsG | CDIV41_320470 | CDIV41_270089 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosomal protein S7 (BS7); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.967 |
| nusA | rpsJ | CDIV41_320470 | CDIV41_270094 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosomal protein S10 (BS13); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.917 |
| nusA | rpsL | CDIV41_320470 | CDIV41_270088 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Ribosomal protein S12 (BS12); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.945 |
| nusA | ylxR | CDIV41_320470 | CDIV41_320469 | Transcription translation coupling factor involved in Rho-dependent transcription termination; Participates in both transcription termination and antitermination. | Putative RNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.969 |
STRING v12.5 is now available!
