Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
isdFPutative heme-iron transport system permease protein IsdF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (324 aa)    
Predicted Functional Partners:
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.993
isdE
High-affinity heme uptake system protein IsdE.
 
 
 0.982
fecE
Putative hemin transport system ATP-binding protein fecE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    0.864
SBO17135.1
Function of strongly homologous gene; cell process.
  
  
 0.858
SBO16067.1
ABC transporter; Function of strongly homologous gene; transporter.
 
 
 0.854
srtB
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.847
SBO17134.1
Function of strongly homologous gene; cell process.
  
  
 0.790
yclP
Putative iron-siderophore ABC transporter (ATP-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.711
SBO17131.1
NRPS-PKS protein putatively involved in antibiotic synthese; Function of strongly homologous gene; cell process.
  
  
 0.702
isdC
Heme uptake protein IsdC.
  
  
 0.692
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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