Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
isdEHigh-affinity heme uptake system protein IsdE. (292 aa)    
Predicted Functional Partners:
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.984
isdF
Putative heme-iron transport system permease protein IsdF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.982
srtB
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.914
SBO16065.1
Iron(III) dicitrate transport system permease protein fecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.868
SBO17135.1
Function of strongly homologous gene; cell process.
  
  
 0.763
isdC
Heme uptake protein IsdC.
  
  
 0.706
svpA
Sortase B cell surface sorting signal domain protein.
  
  
 0.692
SBO17134.1
Function of strongly homologous gene; cell process.
  
  
 0.660
fecE
Putative hemin transport system ATP-binding protein fecE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.657
SBO17131.1
NRPS-PKS protein putatively involved in antibiotic synthese; Function of strongly homologous gene; cell process.
  
  
 0.493
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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