STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO17927.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (226 aa)    
Predicted Functional Partners:
SBO18488.1
Putative uncharacterized domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.523
SBO16902.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.517
SBO18484.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.494
SBO18485.1
Putative ABC transporter ATP-binding protein BCE_3323; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.489
SBO16307.1
Mga helix-turn-helix domain protein (modular protein).
  
     0.474
SBO16863.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.467
cbiQ-2
Cobalt transport family protein.
  
     0.443
SBO17361.1
Mga helix-turn-helix domain protein (modular protein).
  
     0.437
isdC
Heme uptake protein IsdC.
       0.427
svpA
Sortase B cell surface sorting signal domain protein.
       0.424
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.