Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SBO17957.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (363 aa)    
Predicted Functional Partners:
licA-2
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     0.763
SBO16911.1
Phosphotransferase system (PTS) lichenan-specific enzyme IIB component (fragment).
 
     0.586
celB
Cellobiose permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.580
pts7C
PTS system, lactose/cellobiose IIC component family protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.566
licA-3
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     0.551
licB-2
Phosphotransferase system (PTS) lichenan-specific enzyme IIB component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     0.491
licB-3
Phosphotransferase system (PTS) lichenan-specific enzyme IIB component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     0.491
licC
Phosphotransferase system (PTS) lichenan-specific enzyme IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.484
licA
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     0.441
obg
GTPase involved in cell partioning and DNA repair; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.401
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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