STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO17983.1Phage structural domain protein. (397 aa)    
Predicted Functional Partners:
SBO17984.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.924
SBO17985.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.800
SBO17986.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.787
SBO17987.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.741
SBO17981.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (fragment).
       0.726
SBO17982.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.695
SBO17988.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.626
SBO17989.1
Major tail protein 17.1.
  
  
 0.497
ysxC
GTPase involved in ribosome 50S subunit assembly; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.420
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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