Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SBO18070.1Putative Protein involved in establishment of DNA transport in competence; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (384 aa)    
Predicted Functional Partners:
ytxK
Putative nucleic acid methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.756
dprA
Putative DNA processing protein DprA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.722
mecA
Adapter protein MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
 
     0.722
ypiA
Tetratricopeptide repeat family protein.
  
     0.707
pepF
Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.703
yneF
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.668
comEA
Membrane bound high-affinity DNA-binding receptor; Function of homologous gene experimentally demonstrated in an other organism; cell process.
   
  
 0.654
dnaB
Replication initiation and membrane attachment protein.
  
     0.634
SBO18251.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.629
SBO17328.1
YycH family protein.
  
     0.627
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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