STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO18115.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (154 aa)    
Predicted Functional Partners:
ytpR
Putative tRNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.730
SBO16710.1
Universal stress family protein.
  
     0.698
ytpP
Putative thiol-disulfide oxidoreductase with thioredoxin domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.560
ytoP
Glutamyl aminopeptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.489
sftA
DNA translocase; Function of homologous gene experimentally demonstrated in an other organism; cell process; Belongs to the FtsK/SpoIIIE/SftA family.
   
   0.488
hpf
Ribosome-associated sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.429
ytxK
Putative nucleic acid methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.427
SBO17131.1
NRPS-PKS protein putatively involved in antibiotic synthese; Function of strongly homologous gene; cell process.
  
  
 0.424
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.