STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO18118.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (111 aa)    
Predicted Functional Partners:
ytpP
Putative thiol-disulfide oxidoreductase with thioredoxin domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.574
SBO17328.1
YycH family protein.
  
     0.536
yneF
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.526
ytoP
Glutamyl aminopeptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.504
mecA
Adapter protein MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
    0.501
ytpR
Putative tRNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.493
yclI
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.457
SBO17701.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.457
lytE
LysM domain protein.
  
     0.449
SBO17742.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.448
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.