STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO18137.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (413 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 0.976
SBO18136.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.966
SBO17929.1
Putative Nuclease SbcCD subunit C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.936
yhaM
3'-5' exonuclease; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.738
recQ
ATP-dependent DNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.698
rtbI
Ribonuclease toxin of toxin-antitoxin systems RttI-RttJ; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.698
SBO18138.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0342 family.
 
     0.675
ybaR
Putative sulfate transporter YbaR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   0.656
dinG
DnaQ exonuclease/DinG family helicase; 3'-5' exonuclease.
  
 0.656
SBO18476.1
Ankyrin repeat family protein.
    
  0.651
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.