STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcD-2Arginine/ornithine antiporter. (481 aa)    
Predicted Functional Partners:
arcC
Carbamate kinase 1; Belongs to the carbamate kinase family.
  
  
 0.896
arcA
Arginine deiminase.
 
  
 0.757
CBK
Carbamate kinase; Belongs to the carbamate kinase family.
  
  
 0.677
argI
Ornithine carbamoyltransferase 1; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.666
SBO18146.1
Transcriptional regulator, Crp family protein.
 
  
 0.564
opuCA
Glycine betaine/carnitine/choline/choline sulfate ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter.
      
 0.530
SBO17135.1
Function of strongly homologous gene; cell process.
  
 
 0.513
SBO17131.1
NRPS-PKS protein putatively involved in antibiotic synthese; Function of strongly homologous gene; cell process.
  
 
 0.494
treA
Trehalose-6-phosphate hydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.457
mdxL
Oligo-1,4-1,6-alpha-glucosidase (sucrase-maltase-isomaltase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.457
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.