STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO18487.1Putative LPXTG-motif cell wall anchor domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (477 aa)    
Predicted Functional Partners:
SBO18488.1
Putative uncharacterized domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.942
SBO18484.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.912
cbiQ-2
Cobalt transport family protein.
 
     0.912
SBO18485.1
Putative ABC transporter ATP-binding protein BCE_3323; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.905
mdxE
Maltose/maltodextrin-binding lipoprotein; Function of homologous gene experimentally demonstrated in an other organism; lipoprotein.
    
 
 0.596
SBO16307.1
Mga helix-turn-helix domain protein (modular protein).
  
     0.507
prsA
Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
   
 
 0.497
prsA-2
Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
   
 
 0.497
SBO17361.1
Mga helix-turn-helix domain protein (modular protein).
  
     0.496
SBO18489.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.481
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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