STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO18534.1Family glycosyl transferase. (247 aa)    
Predicted Functional Partners:
rfbP
Bacterial sugar transferase.
    
 0.917
SBO18535.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.897
SBO18536.1
Teichoic acid ABC superfamily ATP binding cassette transporter, ABC protein (modular protein).
 
 
 
 0.830
tagO
UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl-1-P transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 
 0.771
tagG
Teichoic acid precursors permease; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.767
SBO18362.1
Putative glycosyl transferase, TagA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the glycosyltransferase 26 family.
 
    
0.744
tagD
Glycerol-3-phosphate cytidylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.647
SBO18537.1
Hypothetical protein; No homology to any previously reported sequences.
       0.635
mnaA
UDP-N-acetylmannosamine 2-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.614
SBO18531.1
Putative CDP-glycerol glycerophosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.554
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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