STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBO18549.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (388 aa)    
Predicted Functional Partners:
ydaM
Putative glycosyltransferase associated to biofilm formation; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.958
SBO18547.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.944
SBO18545.1
Cellulose synthase catalytic subunit.
 
  
 0.939
SBO18548.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.937
SBO18544.1
GGDEF motif membrane protein.
 
   
 0.921
SBO18550.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.763
SBO17395.1
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.751
icaA
Glycosyl transferase, IcaA family; Function of strongly homologous gene; enzyme.
 
  
 0.655
SBO18543.1
Putative Signaling protein YkoW; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.585
SBO18377.1
Putative cellulose synthase subunit A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.571
Your Current Organism:
Carnobacterium divergens
NCBI taxonomy Id: 2748
Other names: ATCC 35677, C. divergens, CCUG 30094, CIP 101029, Carnibacterium divergens, DSM 20623, IFO 15683, JCM 5816, JCM 9133, LMG 9199, LMG:9199, Lactobacillus divergens, NBRC 15683, NCDO 2763, NCIMB 11952, NCTC 13772, NRRL B-14830, strain 66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.