STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MG2_0517Ribonuclease PH. (274 aa)    
Predicted Functional Partners:
MG2_1080
Exosome complex component RRP42.
  
 0.956
MG2_1082
Exosome complex RNA-binding protein Rrp4.
  
 0.948
MG2_1500
Putative RNA-binding protein.
   
 0.940
MG2_0378
Ribonuclease II/R.
   
 0.934
MG2_0240
DNA primase.
    
 0.923
MG2_0446
Putative RNA-processing protein.
   
  0.750
MG2_0477
Cold shock protein (beta-ribbon, CspA family).
    
 0.729
MG2_1516
Putative Nop56p-like protein; Implicated in ribosomal biogenesis.
   
  0.723
MG2_0659
Peptidase U62, putative microcin-like modulator of DNA gyrase.
     
 0.717
MG2_0133
30S ribosomal protein S4 / S4P.
  
  0.698
Your Current Organism:
uncultured Poseidoniales archaeon
NCBI taxonomy Id: 274854
Other names: u. Candidatus Poseidoniales archaeon, uncultured Candidatus Poseidoniales archaeon, uncultured marine group II euryarchaeote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.