STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MG2_1221RtcB family protein; Predicted to be implicated in RNA processing. (491 aa)    
Predicted Functional Partners:
MG2_1188
Putative protein in Archease protein family (DUF101/UPF0211).
  
 0.968
MG2_0519
ATP-dependent RNA helicase.
   
 0.793
MG2_0992
ATP-dependent RNA helicase.
   
 0.793
MG2_1360
ATP-dependent RNA helicase RhlE.
   
 0.793
MG2_1515
Fibrillarin-like rRNA methylase.
   
 0.793
MG2_0812
Peptide chain release factor 1.
  
    0.598
MG2_1220
alanyl-tRNA synthetase.
  
    0.556
MG2_1184
tRNA splicing endonuclease.
    
 0.441
MG2_1062
Putative RNA 2'-phosphotransferase.
     
 0.421
Your Current Organism:
uncultured Poseidoniales archaeon
NCBI taxonomy Id: 274854
Other names: u. Candidatus Poseidoniales archaeon, uncultured Candidatus Poseidoniales archaeon, uncultured marine group II euryarchaeote
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.