STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MG2_1519DNA polymerase sliding clamp subunit; PCNA homolog. (198 aa)    
Predicted Functional Partners:
MG2_0032
Flap endonuclease-1.
  
 0.999
MG2_0147
DNA primase large subunit.
 
 
 0.999
MG2_0675
DNA mismatch repair protein MutL.
   
 0.999
MG2_0676
DNA mismatch repair protein MutS.
   
 0.999
MG2_1122
DNA primase small subunit.
 
 
 0.999
MG2_1211
DNA Polymerase IV/Kappa.
   
 0.999
MG2_1413
DNA polymerase II small subunit.
  
 0.999
MG2_1387
50S ribosomal protein L40e.
  
  0.989
MG2_0137
DNA polymerase II large subunit.
 
 
 
 0.974
MG2_0274
DNA polymerase III subunit epsilon.
  
 0.969
Your Current Organism:
uncultured Poseidoniales archaeon
NCBI taxonomy Id: 274854
Other names: u. Candidatus Poseidoniales archaeon, uncultured Candidatus Poseidoniales archaeon, uncultured marine group II euryarchaeote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.