STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH55_04180Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)    
Predicted Functional Partners:
EH55_04185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
EH55_11200
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.699
EH55_06580
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
EH55_04190
Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
EH55_04175
Molybdenum ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
EH55_02815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.506
EH55_09865
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.481
EH55_03480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.463
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
 
 0.460
EH55_07940
Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.
 
  
 0.443
Your Current Organism:
Synergistes jonesii
NCBI taxonomy Id: 2754
Other names: ATCC 49833, S. jonesii, strain 78-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.