STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH55_05105Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)    
Predicted Functional Partners:
EH55_06755
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.865
EH55_06750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.843
EH55_05095
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
EH55_05100
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
EH55_04660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.637
EH55_06760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.632
EH55_05090
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
EH55_05000
Glycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.458
EH55_13485
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.453
EH55_05125
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.451
Your Current Organism:
Synergistes jonesii
NCBI taxonomy Id: 2754
Other names: ATCC 49833, S. jonesii, strain 78-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.