STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH55_08745Selenium metabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family. (190 aa)    
Predicted Functional Partners:
EH55_05405
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.980
EH55_00305
Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
   
 0.951
EH55_08740
Aminotransferase class V; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.924
EH55_07500
Segregation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.755
EH55_00055
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.753
EH55_01450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.727
EH55_01530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.717
selA
Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.689
EH55_08755
Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.624
EH55_04590
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.573
Your Current Organism:
Synergistes jonesii
NCBI taxonomy Id: 2754
Other names: ATCC 49833, S. jonesii, strain 78-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.