STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH55_11515Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
EH55_11505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.943
EH55_11300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.919
EH55_11490
Sirohydrochlorin cobaltochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
EH55_11510
Cobalt-precorrin-2 C(20)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.
 
     0.870
EH55_11500
Ferrichrome ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.792
EH55_11495
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.789
EH55_11530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.768
EH55_01085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
EH55_11565
Porphyrin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.728
EH55_11555
cobalt-precorrin-6A reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
Your Current Organism:
Synergistes jonesii
NCBI taxonomy Id: 2754
Other names: ATCC 49833, S. jonesii, strain 78-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.