STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODJ58387.1NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
menG
Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.872
ODJ58388.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ODJ58386.1
Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.659
ODJ58389.1
Bacterial regulatory s, tetR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
ODJ58642.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.468
ODJ58358.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.468
ODJ59818.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.404
aspB
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.404
ODJ58651.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.404
Your Current Organism:
Brochothrix thermosphacta
NCBI taxonomy Id: 2756
Other names: ATCC 11509, B. thermosphacta, CCUG 35132, CIP 103251, DSM 20171, IFO 12167, JCM 20628, LMG 17208, LMG:17208, Microbacterium thermosphactum, NBRC 12167, NCIB 10018, NCIB:10018, NCTC 10822
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.