Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KIX84833.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
KGQ21336.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.968
KGQ22141.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.948
KGQ22177.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.852
KIX84346.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.797
KGQ22178.2
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.709
KGQ21216.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.652
KGQ22137.2
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.520
KGQ22139.2
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.453
KGQ21686.2
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
KGQ22877.2
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.421
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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