KGQ21317.1 protein (Thermus filiformis) - STRING interaction network

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gene neighborhood

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textmining

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protein homology

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[Homology]

Score

KGQ21317.1

DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)

Predicted Functional Partners:

KGQ21321.2

0.880

rpoC

0.715

rpoB

0.715

sigA

0.715

rpoZ

0.715

rpoA

0.715

KIX84547.1

0.710

KGQ21367.1

0.679

KGQ21365.1

0.668

KGQ21320.2

0.536

Your Current Organism:

Thermus filiformis

NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGQ21317.1	KGQ21320.2	THFILI_00920	THFILI_00925	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
KGQ21317.1	KGQ21321.2	THFILI_00920	THFILI_00930	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KGQ21317.1	KGQ21365.1	THFILI_00920	THFILI_02945	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
KGQ21317.1	KGQ21367.1	THFILI_00920	THFILI_02950	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
KGQ21317.1	KIX84547.1	THFILI_00920	THFILI_07885	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
KGQ21317.1	rpoA	THFILI_00920	THFILI_10535	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.715
KGQ21317.1	rpoB	THFILI_00920	THFILI_06545	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.715
KGQ21317.1	rpoC	THFILI_00920	THFILI_06540	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.715
KGQ21317.1	rpoZ	THFILI_00920	THFILI_08565	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.715
KGQ21317.1	sigA	THFILI_00920	THFILI_08465	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.715
KGQ21320.2	KGQ21317.1	THFILI_00925	THFILI_00920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
KGQ21320.2	KGQ21321.2	THFILI_00925	THFILI_00930	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
KGQ21321.2	KGQ21317.1	THFILI_00930	THFILI_00920	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KGQ21321.2	KGQ21320.2	THFILI_00930	THFILI_00925	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
KGQ21321.2	KGQ21365.1	THFILI_00930	THFILI_02945	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
KGQ21321.2	rpoA	THFILI_00930	THFILI_10535	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
KGQ21321.2	rpoB	THFILI_00930	THFILI_06545	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
KGQ21321.2	rpoC	THFILI_00930	THFILI_06540	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.977
KGQ21321.2	rpoZ	THFILI_00930	THFILI_08565	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
KGQ21321.2	sigA	THFILI_00930	THFILI_08465	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.571