STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGQ22210.2CRISPR-associated protein Cse2; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)    
Predicted Functional Partners:
KGQ22204.1
CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
KGQ22205.1
CRISPR-associated protein Cse4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
KGQ22207.2
CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
KIX84744.1
CRISPR-associated protein Cse3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
KGQ22203.1
CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
KIX84507.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
KIX84397.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
KGQ21370.2
CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
KGQ22753.2
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
KGQ21365.1
CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.